This Jmol page should automatically switch to different modes depending upon browser capabilities. It can use the signed Jmol applet, the unsigned Jmol applet with server-side help, and GLmol using HTML5 with (iPad/iPhone) or without (Android) WebGL. On the server side, it uses JmolData.jar for delivering cross-domain models into GLmol or the unsigned applet. GLmol interface written by Takanori Nakane. See also ChemDoodle options.

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For NCI, enter a molecule name, a CAS registry number, an IUPAC name, or some other sort of identifier in the box and press [ENTER]. For PubChem, enter a name or CAS number. Note that these input controls can be easily hidden for a more standard Jmol look.

Current status: 6/12/12 - first demo of GLmol

rendering options:
unsigned Jmol applet
signed Jmol applet
GLmol (WebGL)
GLmol (HTML5 only)
not GLmol
image only

keyword searches
=caffeine? (RCSB)
=1blu? (RCSB)
=1crn? (RCSB)
this-domain calls - no server
load caffeine.mol
load 1crn.pdb

direct database calls - no server
load $caffeine (from NCI)
load =1blu (cartoon, from RCSB)
load :1983 (PubChem CID)
load :aspirin (PubChem name)
load :smiles:CC/C=C/CC (PubChem SMILES)
:caffeine (PubChem, with mep)
load ==HEM (RCSB ligand)