This test page for
jmol.x3dna.org
demonstrates capabilities in Jmol that involve RNA and DNA secondary structure using real-time DSSR analysis provided by
3DNA
.
The commands being issued by the buttons are displayed in the box under the applet.
Jmol._Canvas2D (Jmol) "jmolApplet0"
[x]
with hydrogens
display water
display protein
Examples:
T-RNA (1ehz)
P4 Hairpin Loop (2m5u)
G-Bulge (2m4w)
U/G Wobble Base Pair (4jab)
I-V Kissing Loop (2mi0)
GUAA tetraloop E. Coli 23 S rRNA (1msy)
L7Ae kink turn (4c40)
telomerase CR4/5 domain (2mhi)
THF Riboswitch (4lvv)
glyQS T box riboswitch+tRNA (4mgn)
yeast phenylalanine tRNA -- uncorrected (1d66)
yeast phenylalanine tRNA -- corrected (1d66)