jmol1 is ready

loading... j2s/core/package.js

loading... j2s/core/core.z.js -- required by ClazzNode

Jmol JavaScript applet jmol1_object__246769292143953__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmol1_object__246769292143953__)

viewerOptions:

{ "name":"jmol1_object","applet":true,"documentBase":"https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/cover.htm","platform":"J.awtjs2d.Platform","fullName":"jmol1_object__246769292143953__","codePath":"https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/j2s/","display":"jmol1_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"246769292143953","bgcolor":"white" }

setting document base to "https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/cover.htm"

Jmol Version: 14.1.11_2014.03.07 2014-03-07 14:38:

java.vendor: Java2Script (HTML5)

java.version: JSmol 14.1.11 Mar 1, 2014

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmol1_object (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

Jmol getValue ATOMMOVEDCallback null

Jmol getValue CLICKCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmol1_object__246769292143953__ ready

loading... j2s/core/corescript.z.js

script 1 started

loading... j2s/core/corezip.z.js

FileManager opening 1 https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png

FileManager checking PNGJ cache for https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|JmolManifest.txt

ZipUtil cached 59230 bytes from https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png

https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|state.spt

https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|JmolManifest.txt

https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|1hxw.pdb.gz

https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png

https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|Jmol_version_13.0.7_dev__2012-10-12_22.06

FileManager opening 3 https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|JmolManifest.txt

FileManager checking PNGJ cache for https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|JmolManifest.txt

FileManager using memory cache https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|JmolManifest.txt

FileManager checking PNGJ cache for https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|state.spt

FileManager using memory cache https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|state.spt

loading... j2s/JV/StateCreator.js

loading... j2s/JV/JmolStateCreator.js -- required by JV.StateCreator

FileManager.getAtomSetCollectionFromFile(https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|1hxw.pdb.gz)

FileManager checking PNGJ cache for https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|1hxw.pdb.gz

FileManager using memory cache https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|1hxw.pdb.gz

The Resolver thinks Pdb

loading... j2s/core/corebio.z.js

loading... j2s/J/render/MeshRenderer.js -- required by J.renderbio.BioShapeRenderer

loading... j2s/J/shape/Mesh.js

loading... j2s/JW/Hermite.js

HYDROLASE/HYDROLASE INHIBITOR 24-JAN-97 1HXW

HIV-1 PROTEASE DIMER COMPLEXED WITH A-84538

loading... j2s/core/coresym.z.js

found biomolecule 1: A, B

biomolecule 1: number of transforms: 1

Time for openFile(https://chemapps.stolaf.edu/jmol/jsmol-2014-03-08/data/1hxw.png|1hxw.pdb.gz): 1581 ms

reading 2202 atoms

ModelSet: haveSymmetry:false haveUnitcells:true haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Babel

2202 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

loading... j2s/core/corescriptmath.z.js

unrecognized SET parameter in Jmol state script (set anyway): dynamicmeasurements

loading... j2s/core/coretext.z.js

loading... j2s/core/corescriptcmd.z.js

loading... j2s/J/shapesurface/Contact.js

loading... j2s/core/coresurface.z.js -- required by J.shapesurface.Contact

loading... j2s/J/shape/MeshCollection.js -- required by J.shapesurface.Isosurface

loading... j2s/JW/TriangleData.js -- required by J.jvxl.calc.MarchingCubes

loading... j2s/J/api/Triangulator.js -- required by JW.TriangleData

loading... j2s/J/constant/EnumHBondType.js

loading... j2s/JW/ContactPair.js

contact ID "contact1" ({1852:1901}) hbond;

Contact pairs: 17

loading... j2s/J/jvxl/readers/IsoIntersectReader.js

10 contacts with net volume 5.004599623945453 A^3

contact ID "contact1" fill noMesh noDots notFrontOnly fullylit;

loading... j2s/J/shape/Bbcage.js

loading... j2s/J/shape/Uccage.js

1938 atoms hidden

loading... j2s/J/rendersurface/ContactRenderer.js

loading... j2s/J/render/BbcageRenderer.js

loading... j2s/J/render/CageRenderer.js -- required by J.render.BbcageRenderer

loading... j2s/J/render/UccageRenderer.js